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BioPatML.NET – a bioinformatic pattern search engine

Toh, Samuel Yu, Buckingham, Lawrence, Hogan, James M., Maetschke, Stefan R., & Towsey, Michael W. (2010) BioPatML.NET – a bioinformatic pattern search engine. In 4th eResearch Australasia Conference, 8-12 November 2010, Royal Pines Resort, Gold Coast, QLD. (Unpublished)

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Abstract

In the present paper, we introduce BioPatML.NET, an application library for the Microsoft Windows .NET framework [2] that implements the BioPatML pattern definition language and sequence search engine. BioPatML.NET is integrated with the Microsoft Biology Foundation (MBF) application library [3], unifying the parsers and annotation services supported or emerging through MBF with the language, search framework and pattern repository of BioPatML. End users who wish to exploit the BioPatML.NET engine and repository without engaging the services of a programmer may do so via the freely accessible web-based BioPatML Editor, which we describe below.

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ID Code: 46710
Item Type: Conference Item (Presentation)
Additional URLs:
Subjects: Australian and New Zealand Standard Research Classification > INFORMATION AND COMPUTING SCIENCES (080000) > COMPUTER SOFTWARE (080300) > Bioinformatics Software (080301)
Divisions: Past > Schools > Computer Science
Past > QUT Faculties & Divisions > Faculty of Science and Technology
Copyright Owner: Copyright 2010 Queensland University of Technology
Deposited On: 31 Oct 2011 08:23
Last Modified: 31 Oct 2011 08:23

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