The Anadara trapezia transcriptome : a resource for molluscan physiological genomics

Prentis, Peter & Pavasovic, Ana (2014) The Anadara trapezia transcriptome : a resource for molluscan physiological genomics. Marine Genomics, 18(Part B), pp. 113-115.

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Abstract

In this study we undertook deep sequencing of the blood cockle, Anadara trapezia, transcriptome to generate genomic resources for future functional genomics analyses. Over 27 million high quality paired end reads were assembled into 75 024 contigs. Of these contigs, 29 013 (38.7%) received significant BLASTx hits and gene ontology (GO) terms were assigned to 13 718 of these sequences. This resourcewill facilitate physiological genomic studies to test the gene expression response of A. trapezia to various environmental stresses.

Impact and interest:

5 citations in Scopus
11 citations in Web of Science®
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ID Code: 76317
Item Type: Journal Article
Refereed: Yes
Keywords: Arcoida, Genomics, Mollusk , Non-model organism, Physiology, Transcriptome
DOI: 10.1016/j.margen.2014.08.004
ISSN: 1874-7787
Divisions: Current > QUT Faculties and Divisions > Faculty of Health
Current > QUT Faculties and Divisions > Science & Engineering Faculty
Copyright Owner: Copyright 2014 Elsevier
Copyright Statement: This is the author’s version of a work that was accepted for publication in Marine Genomics. Changes resulting from the publishing process, such as peer review, editing, corrections, structural formatting, and other quality control mechanisms may not be reflected in this document. Changes may have been made to this work since it was submitted for publication. A definitive version was subsequently published in Marine Genomics, Vol: 18, Issue: Part B, 2014 DOI: 10.1016/j.margen.2014.08.004
Deposited On: 23 Sep 2014 23:16
Last Modified: 22 Jun 2017 15:01

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