Browse By Person: Lai, John
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Number of items: 23.
An, Jiyuan, Lai, John, Zeng, Lingzao, & Nelson, Colleen (2016) Analysis of differential gene expression based on Bayesian estimation of variance. Current Bioinformatics, 11(2), pp. 164-168.
Seim, Inge, Jeffery, Penny L., Thomas, Patrick B., Walpole, Carina M., Maugham, Michelle, Fung, Jenny N.T., et al. (2016) Multi-species sequence comparison reveals conservation of ghrelin gene-derived splice variants encoding a truncated ghrelin peptide. Endocrine, 52(3), pp. 609-617.
Tevz, Gregor, McGrath, Sean, Demeter, Ryan, Magrini, Vincent, Jeet, Varinder, Rockstroh, Anja, et al. (2016) Identification of a novel fusion transcript between human relaxin-1 (RLN1) and human relaxin-2 (RLN2) in prostate cancer. Molecular and Cellular Endocrinology, 420, pp. 159-168.
Lai, John, An, Jiyuan, Srinivasan, Srilakshmi, Clements, Judith A., & Batra, Jyotsna (2016) A computational analysis of the genetic and transcript diversity at the kallikrein locus. Biological Chemistry. (In Press)
Lai, John, An, Jiyuan, Seim, Inge, Walpole, Carina, Hoffman, Andrea, Moya, Leire, et al. (2015) Fusion transcript loci share many genomic features with non-fusion loci. BMC Genomics, 16(1021).
An, Jiyuan, Lai, John, Wood, David L A, Sajjanhar, Atul, Wang, Chenwei, Tevz, Gregor, et al. (2015) RNASeqBrowser: A genome browser for simultaneous visualization of raw strand specific RNAseq reads and UCSC genome browser custom tracks. BMC Genomics, 16, p. 145.
An, Jiyuan, Lai, John, Sajjanhar, Atul, Batra, Jyotsna, Wang, Chenwei, & Nelson, Colleen C. (2015) J-Circos : an interactive Circos plotter. Bioinformatics, 31(9), pp. 1463-1465.
Lai, John, An, Jiyuan, Nelson, Colleen C., Lehman, Melanie L., Batra, Jyotsna, & Clements, Judith A. (2014) Analysis of androgen and anti-androgen regulation of KLK-related peptidase 2, 3, and 4 alternative transcripts in prostate cancer. Biological Chemistry, 395(9), pp. 1127-1132.
An, Jiyuan, Lai, John, Sajjanhar, Atul, Lehman, Melanie L., & Nelson, Colleen C. (2014) miRPlant : an integrated tool for identification of plant miRNA from RNA sequencing data. BMC Bioinformatics, 15(1), p. 275.
Lai, John & Batra, Jyotsna (2014) Speckle-type POZ protein mutations interrupt tumor suppressor function of speckle-type POZ protein in prostate cancer by affecting androgen receptor degradation. Asian Journal of Andrology, 16(5), pp. 659-660.
Baron, Paul S., Neve, Juliette E., Camp, David, Suraweera, Lekha, Lam, Ann, Lai, John, et al. (2013) Design, synthesis and spectroscopic characterisation of a focused library based on the polyandrocarpamine natural product scaffold. Magnetic Resonance in Chemistry, 51(6), pp. 358-363.
An, Jiyuan, Lai, John, Lehman, Melanie, & Nelson, Colleen (2012) miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data. Nucleic Acid Research, 41(2), pp. 727-737.
Lawrence, M.G., Stephens, C.R., Need, E.F., Lai, J., Buchanan, G., & Clements, J.A. (2012) Long terminal repeats act as androgen-responsive enhancers for the PSA-Kallikrein locus. Endocrinology, 153(7), pp. 3199-3210.
Lawrence, Mitchell, Margaryan, Naira, Loessner, Daniela, Collins, Angus, Kerr, Kris, Turner, Megan, et al. (2011) Reactivation of embryonic nodal signaling is associated with tumor progression and promotes the growth of prostate cancer cells. The Prostate, 71(11), pp. 1198-1209.
Dong, Ying, Lai, John, & Clements, Judith (2010) KLK7 (kallikrein-related peptidase 7). Atlas of Genetics and Cytogenetics in Oncology and Haematology, 14(4), pp. 388-396.
Lawrence, Mitchell, Lai, John, & Clements, Judith (2010) Kallikreins on steroids: structure, function and hormonal regulation of prostate-specific antigen and the extended kallikrein locus. Endocrine Review, 31(4), pp. 407-446.
Lai, John, Lehman, Melanie, Dinger, Marcel, Hendy, Stephen, Mercer, Tim, Seim, Inge, et al. (2010) A variant of the KLK4 gene is expressed as a cis sense-antisense chimeric transcript in prostate cancer cells. RNA, 16(6), pp. 1156-1166.
Lai, John, Dong, Ying, & Clements, Judith (2009) KLK4 (kallikrein-related peptidase 4). Atlas of Genetics and Cytogenetics in Oncology and Haematology, 13(12), pp. 944-949.
Lai, John, Myers, Stephen A., Lawrence, Mitchell, Odorico, Dimitri M., & Clements, Judith A. (2009) Direct progesterone receptor and indirect androgen receptor interactions with the Kallikrein-Related peptidase 4 gene promoter in breast and prostate cancer. Molecular Cancer Research, 7(1), pp. 129-141.
Kaushal, Aneel, Myers, Stephen A., Dong, Ying, Lai, John, Tan, Olivia L., Bui, Loan T., et al. (2008) A novel transcript from the KLKP1 gene is androgen regulated, down-regulated during prostate cancer progression and encodes the first non-serine protease identified from the human kallikrein gene locus. The Prostate, 68(4), pp. 381-399.
Lai, John, Kedda, Mary-Anne, Hinze, Kimberly E., Smith, Robert L. G., Yaxley, John, Spurdle, Amanda B., et al. (2007) PSA/KLK3 AREI promoter polymorphism alters androgen receptor binding and is associated with prostate cancer susceptibility. Carcinogenesis, 28(5), pp. 1032-1039.
An, Jiyuan, Lai, John, Wang, Chenwei, Tevz, Gregor, Lehman, Melanie L., & Nelson, Colleen C. (2015) Visualization of next generation sequencing data. In 2nd Prostate Cancer World Congress, 17-21 August 2015, Cairns Convention Centre, Cairns, Qld.
Lai, John (2006) Functional analyses of polymorphisms in the promoters of the KLK3 and KLK4 genes in prostate cancer. PhD thesis, Queensland University of Technology.