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Items where Subject is "Australian and New Zealand Standard Research Classification > MATHEMATICAL SCIENCES (010000) > APPLIED MATHEMATICS (010200) > Biological Mathematics (010202)"

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Number of items at this level: 117.

Book

Eladdadi, Amina, Kim, Peter, & Mallet, Daniel G. (Eds.) (2014) Mathematical Models of Tumor-Immune System Dynamics. Springer Proceedings in Mathematics & Statistics, 107. Springer, Berlin. (In Press)

Mallet, Dann G. (2008) Haptotaxis in Tumour Growth and Invasion : A Mathematical Modelling Approach. VDM Verlag Dr. Muller Aktiengesellschaft & Co. KG, Germany.

Book Chapter

Anh, Vo, Chen, Yi-Ping, & Yu, Zu-Guo (2005) Visualization and Fractal Analysis of Biological Sequences. In Chen, Y (Ed.) Bioinformatics Technologies. Springer-Verlag, Germany, pp. 313-351.

Malda, Jos & Pettet, Graeme (2008) Mathematicians in biologists' clothes......a clarion call for collaboration. In Flynne, W (Ed.) Biotechnology and Bioengineering. Nova Science Publications, United States of America, New York, Hauppauge, pp. 3-5.

Mallet, Daniel G. & Pettet, Graeme J. (2008) Haptotaxis in Pre-necrotic Avascular Tumours. In Wilson, Lachlan B. (Ed.) Mathematical Biology Research Trends. Nova Science Publishers, Hauppauge, NY.

Journal Article

Adams, Matthew P., Mallet, Daniel G., & Pettet, Graeme J. (2012) Active regulation of the epidermal calcium profile. Journal of Theoretical Biology, 301, pp. 112-121.
Number of full-text downloads 127
Number of citations in Scopus 5
Number of citations in Web of Science® 3

Anh, Vo, Deng, Ji-Qing, Long, Shun-Chao, Yu, Zu-Guo, & Zhou, Li-Qian (2005) A Fractal Method to Distinguish Coding and Non-Coding Sequences in a Complete Genome Based on a Number Sequence Representation. Journal of Theoretical Biology, 232(4), pp. 559-567.
Number of full-text downloads 77
Number of citations in Scopus 27
Number of citations in Web of Science® 18

Araujo, Robyn & McElwain, Sean (2005) A Mixture Theory for the Genesis of Residual Stresses in Growing Tissues II: Solutions to the Biphasic Equations for a Multicell Spheroid. SIAM Journal on Applied Mathematics, 66(2), pp. 447-467.
Number of citations in Scopus 21
Number of citations in Web of Science® 24

Araujo, Robyn & McElwain, Sean (2005) The Nature of the Stresses Induced During Tissue Growth. Applied Mathematics Letters, 18(10), pp. 1081-1088.
Number of citations in Scopus 7
Number of citations in Web of Science® 6

Araujo, Robyn & McElwain, Sean (2006) The Role of Mechanical Host-Tumour Interactions in the Collapse of Tumour Blood Vessels and Tumour Growth Dynamics. Journal of Theoretical Biology, 238, pp. 817-827.
Number of citations in Scopus 6
Number of citations in Web of Science® 5

Bavoil, Patrik, McElwain, Sean, Timms, Peter, & Wilson, David (2006) Type III Secretion, Contact-Dependent Model For The Intracellular Development of Chlamydia. Bulletin of Mathematical Biology, 68(1), pp. 161-178.
Number of citations in Scopus 32
Number of citations in Web of Science® 32

Beiko, Robert G., Keith, Jonathan M., Harlow, Timothy J., & Ragan, Mark A (2006) Searching for Convergence in Phylogenetic Markov Chain Monte Carlo. Systematic Biology, 55(4), pp. 553-565.
Number of citations in Scopus 37
Number of citations in Web of Science® 36

Belward, John A., Turner, Ian W., & Oqielat, Moa'Ath (2009) Numerical investigations of linear least squares methods for derivative estimation. ANZIAM Journal, 50, C844-C857.
Number of full-text downloads 48

Binder, Benjamin J. & Simpson, Matthew (2013) Quantifying spatial structure in experimental observations and agent-based simulations using pair-correlation functions. Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), 88(2), pp. 1-10.
Number of full-text downloads 34
Number of citations in Scopus 3
Number of citations in Web of Science® 3

Bowden, Lucie, Simpson, Matthew, & Baker, Ruth (2013) Design and interpretation of cell trajectory assays. Journal of the Royal Society Interface, 10(88), pp. 1-12.

Chen, Gongfa, Pettet, Graeme J., Pearcy, Mark J., & McElwain, Sean (2007) Comparison of two numerical approaches for bone remodelling. Medical Engineering and Physics, 29(1), pp. 134-139.
Number of citations in Scopus 14
Number of citations in Web of Science® 8

Chen, Gongfa, Pettet, Graeme J., Pearcy, Mark J., & McElwain, Sean (2007) Modelling external bone adaptation using evolutionary structural optimisation. Biomechanical and Modeling in Mechanobiology, 6(4), pp. 275-285.
Number of citations in Scopus 10
Number of citations in Web of Science® 8

Codd, Andrea, Teuscher, Franka, Kyle, Dennis E, Cheng, Qin, & Gatton, Michelle L (2011) Artemisinin-induced parasite dormancy : a plausible mechanism for treatment failure. Malaria Journal, 10, p. 56.
Number of full-text downloads 4
Number of citations in Scopus 23
Number of citations in Web of Science® 19

Denman, Paula, Harkin, Damien, McElwain, Sean, & Upton, Zee (2006) Mathematical Modelling of Aerosolised Skin Grafts Incorporating Keratinocyte Clonal Subtypes. Bulletin of Mathematical Biology, 69(1), pp. 157-179.
Number of citations in Scopus 8

Denman, Paula, McElwain, Sean, & Norbury, John (2007) Analysis of Travelling Waves Associated with the Modelling of Aerosolised Skin Grafts. Bulletin of Mathematical Biology, 69(2), pp. 495-523.
Number of citations in Scopus 6
Number of citations in Web of Science® 5

Dillon, Michael P., Barker, Timothy M., & Pettet, Graeme J. (2008) Effect of inaccuracies in anthropometric data and linked-segment inverse dynamic modeling on kinetics of gait in persons with partial foot amputation. Journal of Rehabilitation Research and Development, 45(9), pp. 1303-1316.
Number of citations in Scopus 9
Number of citations in Web of Science® 7

Ellery, Adam, Simpson, Matthew, McCue, Scott W., & Baker, Ruth (2014) Characterizing transport through a crowded environment with different obstacle sizes. Journal of Chemical Physics, 140(5), 054108.
Number of full-text downloads 14

Ellery, Adam, Simpson, Matthew, McCue, Scott W., & Baker, Ruth (2013) A simplified approach for calculating the moments of action for linear reaction-diffusion equations. Physical Review E (PRE), 88, 054102.
Number of full-text downloads 70
Number of citations in Scopus 1
Number of citations in Web of Science® 1

Ellery, Adam J., Simpson, Matthew J., & McCue, Scott W. (2013) Comment on "Local accumulation times for source, diffusion, and degradation models in two and three dimensions" [J. Chem. Phys. 138, 104121 (2013)]. Journal of Chemical Physics, 139(017101), pp. 1-2.
Number of full-text downloads 47
Number of citations in Scopus 3
Number of citations in Web of Science® 3

Fernando, Anthony, Landman, Kerry A., & Simpson, Matthew (2010) Nonlinear diffusion and exclusion processes with contact interactions. Physical Review E (PRE), 81(1), 011903-1---11903-11.
Number of citations in Scopus 14
Number of citations in Web of Science® 20

Fulford, G.R., Roberts, M.G., & Heesterbeek, J.A.P. (2002) The Metapopulation Dynamics of an Infectious Disease: Tuberculosis in Possums. Theoretical Population Biology, 61(1), pp. 15-29.
Number of citations in Scopus 62
Number of citations in Web of Science® 58

Gardner, Trevor N. & Mishra, Sanjay K. (2003) The biomechanical environment of a bone fracture and its influence upon the morphology of healing. Medical Engineering and Physics, 25(6), pp. 455-464.
Number of citations in Scopus 27
Number of citations in Web of Science® 24

Gardner, Trevor N., Mishra, Sanjay K., & Marks, Laurence (2004) The role of Osteogenic Index, Octahedral Shear Stress and Dilational stress in the ossification of a fracture callus. Medical Engineering and Physics, 26(6), pp. 493-501.
Number of citations in Scopus 9
Number of citations in Web of Science® 8

Gordon, John J., Towsey, Michael W., Hogan, James M., Mathews, Sarah A., & Timms, Peter (2006) Improved prediction of bacterial transcription start sites. Bioinformatics, 22(2), pp. 142-148.
Number of full-text downloads 78
Number of citations in Scopus 34
Number of citations in Web of Science® 31

Harley, K., van Heijster, P., Marangell, R., Pettet, G.J., & Wechselberger, M. (2014) Existence of travelling wave solutions for a model of tumour invasion. SIAM Journal Applied Dynamical Systems, 13(1), pp. 366-396.
Number of full-text downloads 40

Hsieh, Mike, McCue, Scott W., Moroney, Timothy J., & Nelson, Mark I. (2011) Drug diffusion from polymeric delivery devices : a problem with two moving boundaries. The ANZIAM Journal, 52, C549-C566.
Number of full-text downloads 132

Hurst, Cameron P., Catterall, Carla P., & Chaseling, Janet (2008) A comparison of two methods for generating artificial multi-assemblage ecological datasets. Ecological Informatics, 3(4-5), pp. 286-294.
Number of citations in Scopus 3
Number of citations in Web of Science® 4

Johnston, Stuart, Simpson, Matthew, & Baker, Ruth (2012) Mean-field descriptions of collective migration with strong adhesion. Physical Review E, 85(5), 051922-1 .
Number of full-text downloads 41
Number of citations in Scopus 11
Number of citations in Web of Science® 9

Johnston, Stuart, Simpson, Matthew, & McElwain, Sean (2014) How much information can be obtained from tracking the position of the leading edge in a scratch assay? Journal of the Royal Society Interface, 11(97), p. 20140325.
Number of full-text downloads 11

Johnston, Stuart, Simpson, Matthew, McElwain, Sean, Binder, Benjamin J., & Ross, Joshua (2014) Interpreting scratch assays using pair density dynamics and approximate Bayesian computation. Open Biology, 4, pp. 140097-1.
Number of full-text downloads 2

Johnston, Stuart, Simpson, Matthew, & Plank, Michael (2013) Lattice-free descriptions of collective motion with crowding and adhesion. Physical Review E (PRE), 88(6), pp. 1-11.

Keith, Jonathan M, Adams, Peter, Bryant, Darryn, Kroese, Dirk P, Mitchelson, Keith R, Cochran, Duncan A., et al. (2002) A Simulated Annealing Algorithm for Finding Consensus Sequences. Bioinformatics, 18(11), pp. 1494-1499.
Number of citations in Scopus 25
Number of citations in Web of Science® 22

Keith, Jonathan M., Adams, Peter, Bryant, Darryn, Cochran, Duncan A., Lala, Gita H., & Mitchelson, Keith R. (2004) Algorithms for Sequence Analysis via Mutagenesis. Bioinformatics, 20(15), pp. 2401-2410.
Number of citations in Scopus 6
Number of citations in Web of Science® 4

Kitto, Kirsty & Kortschak, R. Daniel (2013) Contextual models and the non-Newtonian paradigm. Progress in Biophysics & Molecular Biology.
Number of full-text downloads 57
Number of citations in Scopus 2
Number of citations in Web of Science® 1

Landman, Kerry A., Pettet, Graeme J., & Newgreen, Donald F. (2003) Chemotactic cellular migration: Smooth and discontinous travelling wave solutions. SIAM Journal on Applied Mathematics, 63(5), pp. 1666-1681.
Number of full-text downloads 338
Number of citations in Scopus 12
Number of citations in Web of Science® 13

Lewis, Miranda C., MacArthur, Ben D., Malda, Jos, Pettet, Graeme J., & Please, Colin P. (2005) Heterogeneous proliferation within engineered cartilaginous tissue: The role of oxygen tension. Biotechnology and Bioengineering, 91(5), pp. 607-615.
Number of citations in Scopus 85
Number of citations in Web of Science® 83

Macarthur, Ben, Pettet, Graeme, & Please, Colin (2005) A Mathematical Model of Dynamic Glioma-Host Interactions: Receptor-Mediated Invasion and Local Proteolysis. Mathematical Medicine and Biology, 22(3), pp. 247-264.
Number of citations in Scopus 5
Number of citations in Web of Science® 5

Mallet, Daniel G. & Pettet, Graeme J. (2006) A Mathematical Model of Integrin-Mediated Haptotactic Cell Migration. Bulletin of Mathematical Biology, 68(2), pp. 231-253.
Number of full-text downloads 343
Number of citations in Scopus 14
Number of citations in Web of Science® 14

Mallet, Daniel G. & Trisilowati, (2012) In silico experimental modeling of cancer treatment. ISRN Oncology, 2012.
Number of full-text downloads 99

Mallet, Daniel G., Turner, Ian W., & Pettet, Graeme J. (2004) Application of the control volume method to a mathematical model of cell migration. The ANZIAM Journal, 45(E), C891-C904.

Mallet, Daniel G. & de Pillis, Lisette G. (2006) A cellular automata model of tumor-immune system interactions. Journal of Theoretical Biology, 239(3), pp. 334-350.
Number of full-text downloads 860
Number of citations in Scopus 90
Number of citations in Web of Science® 75

Mallet, Dann G., Bagher-Oskouei, Masoumeh, Farr, Anna Charisse, Simpson, Daniel Peter, & Heymer, Kelly-Jean (2013) A mathematical model of chlamydial infection incorporating movement of chlamydial particles. Bulletin of Mathematical Biology, 75(11), pp. 2257-2270.
Number of citations in Scopus 3
Number of citations in Web of Science® 2

Mallet, Dann G., Heymer, Kelly-Jean, Rank, Roger G., & Wilson, David P. (2009) Chlamydial infection and spatial ascension of the female genital tract : a novel hybrid cellular automata and continuum mathematical model. FEMS Immunology & Medical Microbiology, 57(2), pp. 173-182.
Number of full-text downloads 46
Number of citations in Scopus 6
Number of citations in Web of Science® 6

Markham, Deborah C., Simpson, Matthew, Maini, Philip K., Gaffney, Eamonn, & Baker, Ruth (2014) Comparing methods for modelling spreading cell fronts. Journal of Theoretical Biology, 353, pp. 95-103.
Number of citations in Scopus 2
Number of citations in Web of Science® 2

Markham, Deborah C., Simpson, Matthew, Maini, Philip K., Gaffney, Eamonn, & Baker, Ruth (2013) Incorporating spatial correlations into multispecies mean-field models. Physical Review E, 88(5), 052713-1-052713-9.
Number of full-text downloads 14
Number of citations in Scopus 2
Number of citations in Web of Science® 1

Markham, Deborah C., Simpson, Matthew J, & Baker, Ruth E. (2013) Simplified method for including spatial correlations in mean-field approximations. Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), 87(6), pp. 1-10.
Number of full-text downloads 44
Number of citations in Scopus 5
Number of citations in Web of Science® 4

Marquart, Louise, Butterworth, Alice, McCarthy, James S., & Gatton, Michelle L. (2012) Modelling the dynamics of Plasmodium falciparum histidine-rich protein 2 in human malaria to better understand malaria rapid diagnostic test performance. Malaria Journal, 11, p. 74.
Number of full-text downloads 4
Number of citations in Scopus 2
Number of citations in Web of Science® 3

McBryde, Emma, McElwain, Sean, & Pettitt, Tony (2007) A Stochastic Mathematical Model of Methicillin Resistant Staphylococcus Aureus Transmission in an Intensive Care Unit: Predicting the Impact of Interventions. Journal of Theoretical Biology, 245(3), pp. 470-481.
Number of citations in Scopus 48
Number of citations in Web of Science® 46

McElwain, D. L. S., Jones, M. B., Fulford, G., Collins, M. J., & Roberts, A. P. (2006) The effect of the lipid layer on tear film behaviour. Bulletin of Mathematical Biology, 68(6), pp. 1355-1381.
Number of citations in Scopus 20
Number of citations in Web of Science® 19

McElwain, Sean, Addison-Smith, Beth, & Maini, Philip K. (2008) A simple mechanistic model of sprout spacing in tumour-associated angiogenesis. Journal of Theoretical Biology, 250(1), pp. 1-15.
Number of citations in Scopus 9
Number of citations in Web of Science® 9

McElwain, Sean, Cumming, Benjamin Donald, & Upton, Zee (2009) A mathematical model of wound healing and subsequent scarring. Journal of The Royal Society : Interface, 7(42), pp. 19-24.
Number of citations in Scopus 14
Number of citations in Web of Science® 13

McElwain, Sean & Wilson, David (2005) Diffusion Theory can be Applied to Antibodies Attaching to Ligand Sites. The ANZIAM Journal, 46(4), pp. 495-505.

Mcbryde, Emma & McElwain, Sean (2006) A Mathematical Model Investigating the Impact of an Environmental Reservoir on Prevalence and Control of Vancomycin-Resistant Enterococci. Journal of Infectious Diseases, 193(10), pp. 1473-1474.
Number of citations in Scopus 10

Menon, Shakti N., Flegg, Jennifer, McCue, Scott W., Schugart, Richard C., Dawson, Rebecca A., & McElwain, Sean (2012) Modelling the interaction of keratinocytes and fibroblasts during normal and abnormal wound healing processes. Proceedings of the Royal Society B, 279, pp. 3329-3338.
Number of full-text downloads 63
Number of citations in Scopus 4
Number of citations in Web of Science® 3

Murphy, Kelly E., Hall, Cameron L., Maini, Philip K., McCue, Scott W., & McElwain, Sean (2012) A fibrocontractive mechanochemical model of dermal wound closure incorporating realistic growth factor kinetics. Bulletin of Mathematical Biology, 74(5), pp. 1143-1170.
Number of full-text downloads 71
Number of citations in Scopus 7
Number of citations in Web of Science® 6

Murphy, Kelly E., Hall, Cameron L., McCue, Scott W., & McElwain, D.L. Sean (2011) A two-compartment mechanochemical model of the roles of transforming growth factor-beta and tissue tension in dermal wound healing. Journal of Theoretical Biology, 272(1), pp. 145-159.
Number of full-text downloads 94
Number of citations in Scopus 11
Number of citations in Web of Science® 10

Murphy, Kelly E., McCue, Scott W., & McElwain, Sean (2012) Clinical strategies for the alleviation of contractures from a predictive mathematical model of dermal repair. Wound Repair and Regeneration, 20(2), pp. 194-202.
Number of full-text downloads 58
Number of citations in Scopus 3
Number of citations in Web of Science® 2

Nelson, Martin, Sutton, Kelly, Brook, Bindi, Mallet, Daniel G., Simpson, Daniel P., & Rank, Roger G. (2014) STI-GMaS : an open-source environment for simulation of sexually-transmitted infections. BMC Systems Biology, 8(66).
Number of full-text downloads 6

Penington, Catherine, Hughes, Barry, & Landman, Kerry (2011) Building macroscale models from microscale probabilistic models : a general probabilistic approach for nonlinear diffusion and multispecies phenomena. Physical Review E, 84, 041120-1.
Number of full-text downloads 2
Number of citations in Scopus 13
Number of citations in Web of Science® 14

Penington, Catherine, Korvasova, Karolina, Hughes, Barry, & Landman, Kerry (2012) Collective motion of dimers. Physical Review E, 86, 051909-1.
Number of full-text downloads 1
Number of citations in Scopus 4
Number of citations in Web of Science® 4

Penington, Catherine J., Hughes, Barry D., & Landman, Kerry A. (2014) Interacting motile agents : taking a mean-field approach beyond monomers and nearest-neighbor steps. Physical Review E, 89(3), 032714.
Number of full-text downloads 3

Plank, Michael & Simpson, Matthew (2013) Lattice-free models of cell invasion : discrete simulations and travelling waves. Bulletin of Mathematical Biology, 75(11), pp. 2150-2166.
Number of citations in Scopus 3
Number of citations in Web of Science® 3

Plank, Michael & Simpson, Matthew (2012) Models of collective cell behaviour with crowding effects : comparing lattice-based and lattice-free approaches. Journal of the Royal Society Interface.
Number of full-text downloads 22
Number of citations in Scopus 11
Number of citations in Web of Science® 11

Simpson, Matthew, Baker, Ruth, & McCue, Scott W. (2011) Models of collective cell spreading with variable cell aspect ratio : a motivation for degenerate diffusion models. Physical Review E (PRE), 83, 021901-1 .
Number of full-text downloads 104
Number of citations in Scopus 20
Number of citations in Web of Science® 20

Simpson, Matthew, Binder, Benjamin J., Haridas, Parvathi, Wood, Benjamin, Treloar, Katrina, McElwain, Sean, et al. (2013) Experimental and modelling investigation of monolayer development with clustering. Bulletin of Mathematical Biology, 75(5), pp. 871-889.
Number of full-text downloads 12
Number of citations in Scopus 13
Number of citations in Web of Science® 12

Simpson, Matthew & Ellery, Adam (2012) An analytical solution for diffusion and nonlinear uptake of oxygen in a spherical cell. Applied Mathematical Modelling, 36(7), pp. 3329-3334.
Number of full-text downloads 116
Number of citations in Scopus 5
Number of citations in Web of Science® 5

Simpson, Matthew, Ellery, Adam, McCue, Scott W., & Baker, Ruth (2013) Critical timescales and time intervals for coupled linear processes. ANZIAM Journal, 54(3), pp. 127-142.
Number of full-text downloads 60
Number of citations in Scopus 3
Number of citations in Web of Science® 3

Simpson, Matthew, Foy, Brody, & McCue, Scott W. (2013) Travelling waves for a velocity–jump model of cell migration and proliferation. Mathematical Biosciences, 244(2), pp. 98-106.
Number of full-text downloads 63

Simpson, Matthew, Haridas, Parvathi, & McElwain, Sean (2014) Do pioneer cells exist? PLOS ONE, 9(1), e85488.
Number of full-text downloads 33

Simpson, Matthew, Landman, Kerry A., & Hughes, Barry (2010) Cell invasion with proliferation mechanisms motivated by time-lapse data. Physica A : Statistical Mechanics and its Applications, 389(18), pp. 3779-3790.
Number of full-text downloads 66
Number of citations in Scopus 30
Number of citations in Web of Science® 30

Simpson, Matthew, Landman, Kerry A., Hughes, Barry, & Fernando, Anthony (2010) A model for mesoscale patterns in motile populations. Physica A: Statistical Mechanics and its Applications, 389(7), pp. 1412-1424.
Number of full-text downloads 51
Number of citations in Scopus 24
Number of citations in Web of Science® 24

Simpson, Matthew & Mercer, Geoff (2012) Editorial : infectious disease modelling. ANZIAM Journal, 54(1-2).
Number of full-text downloads 64

Simpson, Matthew, Sharp, Jesse, & Baker, Ruth (2014) Distinguishing between mean-field, moment dynamics and stochastic descriptions of birth-death-movement processes. Physica A Statistical Mechanics and its Applications, 395, pp. 236-246.
Number of citations in Scopus 2
Number of citations in Web of Science® 1

Simpson, Matthew, Towne, Chris L., McElwain, Sean, & Upton, Zee (2010) Migration of breast cancer cells : understanding the roles of volume exclusion and cell-to-cell adhesion. Physical Review E (PRE), 82(4), 041901-1---41901-9.
Number of full-text downloads 121
Number of citations in Scopus 27
Number of citations in Web of Science® 26

Smith, David L., Perkins, Alex, Reiner, Robert C., Barker, Christopher M., Niu, Tianchan, Fernando Chaves, Luis, et al. (2014) Recasting the theory of mosquito-borne pathogen transmission dynamics and control. Transactions of the Royal Society of Tropical Medicine and Hygiene, 108(4), pp. 185-197.
Number of full-text downloads 27
Number of citations in Scopus 3
Number of citations in Web of Science® 2

Treloar, Katrina & Simpson, Matthew (2013) Sensitivity of edge detection methods for quantifying cell migration assays. PLOS ONE, 8(6).
Number of full-text downloads 102
Number of citations in Scopus 8
Number of citations in Web of Science® 8

Treloar, Katrina, Simpson, Matthew, Haridas, Parvathi, Manton, Kerry, Leavesley, David I., McElwain, Sean, et al. (2013) Multiple types of data are required to identify the mechanisms influencing the spatial expansion of melanoma cell colonies. BMC Systems Biology, 7(137).
Number of full-text downloads 10
Number of citations in Scopus 4
Number of citations in Web of Science® 3

Treloar, Katrina, Simpson, Matthew, & McCue, Scott W. (2013) Velocity jump processes with proliferation. Journal of Physics A : Mathematical and General, 46(1), pp. 1-17.
Number of full-text downloads 52
Number of citations in Scopus 1
Number of citations in Web of Science® 1

Treloar, Katrina, Simpson, Matthew, McElwain, Sean, & Baker, Ruth (2014) Are in vitro estimates of cell diffusivity and cell proliferation rate sensitive to assay geometry? Journal of Theoretical Biology, 356, pp. 71-84.
Number of full-text downloads 20
Number of citations in Scopus 1
Number of citations in Web of Science® 1

Trisilowati,, McCue, Scott W., & Mallet, Daniel G. (2013) Numerical solution of an optimal control model of dendritic cell treatment of a growing tumour. ANZIAM Journal, 54, C664-C680.
Number of full-text downloads 80

Yang, Jian-Yi, Yu, Zuguo, & Anh, Vo (2007) Correlations Between Designability and Various Structural Characteristics of Protein Lattice Models. Journal of Chemical Physics, 126(19), pp. 1-12.
Number of citations in Scopus 3
Number of citations in Web of Science® 3

Yang, Qianqian, Moroney, Timothy J., Burrage, Kevin, Turner, Ian, & Liu, Fawang (2011) Novel numerical methods for time-space fractional reaction diffusion equations in two dimensions. Australian and New Zealand Industrial and Applied Mathematics Journal, 52, C395-C409.
Number of full-text downloads 202

Young, Heather, Bergner, Annette, Simpson, Matthew, McKeown, Sonja, Anderson, Colin, & Enomoto, Hideki (2014) Colonizing while migrating : how do individual enteric neural crest cells behave? BMC Biology, 12(23).
Number of full-text downloads 3
Number of citations in Web of Science® 1

Yu, Zuguo, Zhan, Xiao-Wen, Han, Guo-Sheng, Wang, Roger, Anh, Vo, & Chu, Ka-Hou (2010) Proper Distance Metrics for Phylogenetic Analysis Using Complete Genomes without Sequence Alignment. International Journal of Molecular Sciences, 11(3), pp. 1141-1154.
Number of citations in Scopus 15
Number of citations in Web of Science® 8

Zhou, Yu, Yu, Zu-Guo, & Anh, Vo V. (2007) Cluster protein structures using recurrence quantification analysis on coordinates of alpha-carbon atoms of proteins. Physics Letters. Section A: General, Atomic and Solid State Physics, 368(3/4), pp. 314-319.
Number of full-text downloads 155
Number of citations in Scopus 8
Number of citations in Web of Science® 7

de Pillis, Lisette G., Mallet, Daniel G., & Radunskaya, Ami E. (2006) Spatial Tumor-Immune Modeling. Computational and Mathematical Methods in Medicine, 7(2-3), pp. 159-176.
Number of citations in Scopus 20

Conference Paper

Adams, Matthew P., Mallet, Daniel G., & Pettet, Graeme J. (2012) Solution methods for advection-diffusion-reaction equations on growing domains and subdomains, with application to modelling skin substitutes. In Gu, YuanTong & Saha, Suvash C. (Eds.) Proceedings of 4th International Conference on Computational Methods (ICCM2012), Gold Coast, Qld. (In Press)
Number of full-text downloads 148

Adams, Matthew P., Mallet, Daniel G., & Pettet, Graeme J. (2012) A continuum model of the growth of engineered epidermal skin substitutes. In Proceedings of the 10th Biennial Engineering Mathematics and Applications Conference, The ANZIAM Journal, Australia and New Zealand Industrial and Applied Mathematics, University of Technology Sydney, N.S.W, C90-C109.
Number of full-text downloads 76

Anh, Vo, Yang, Jian-Yi, & Yu, Zuguo (2008) Protein structure classification based on chaos game representation. In Kellenberger, P (Ed.) The Proceedings of the Fourth International Conference on Natural Computation (ICNC 2008), 18 - 20 October 2008, China, Shandong, Jinan.
Number of citations in Scopus 1
Number of citations in Web of Science® 1

Anh, Vo & Yu, Zu-Guo (2005) Phylogenetic Tree Based on Complete Genomes Using Fractal and Correlation Analyses without Sequence Alignment. In Callaos, N, Chavez, R, Franger, S, Raut, R, & He, Z (Eds.) Proceedings of The 9th World Multi-Conference on Systemics, Cybernetics and Informatics 2005 (WMSCI 2005), 10 July - 13 July 2005, United States of America, Florida, Orlando.

Anh, Vo & Yu, Zu-Guo (2004) Phylogenetic Tree of Prokaryotes Based on Complete Genomes using Fractal and Correlation Analyses. In Proceedings of the Second Asia-Pacific Bioinformatics Conference (APBC2004)., 18-22 January 2004, Dunedin, New Zealand.

Anh, Vo, Yu, Zu-Guo, & Zhou, Li-Qian (2005) Fractal and Dynamical Language Methods to Construct Phylogenetic Tree Based on Protein Sequences from Complete Genomes. In Wang, L, Chen, K, & Ong, Y (Eds.) Lecture Notes in Computer Science (LNCS 3611) - Advances in Natural Computation: First International Conference, ICNC 2005, 27-29 August 2005, China, Changsha.
Number of citations in Scopus 2
Number of citations in Web of Science® 3

Anh, Vo, Yu, Zuguo, & Zhou, Yu (2008) Protein structure classification using local Holder exponents estimated by wavelet transfom. In Kellenberger, P (Ed.) The Proceedings of the Fourth International Conference on Natural Computation (ICNC 2008), 18 - 20 October 2008, China, Shandong, Jinan.

Araujo, Robyn & McElwain, Sean (2003) An Anisotropic Model of Vascular Tumor Growth: Implications for Vascular Collapse. In Bathe, K (Ed.) Computational Fluid and Solid Mechanics, 17 - 20 June 2003, Massachusetts Institute of Technology Cambridge, USA.

Araujo, Robyn & McElwain, Sean (2003) The Genesis of Residual Stresses and Vascular Collapse in Solid Tumours. In May, R & Blyth, W (Eds.) EMAC 2003 Proceedings, 9 - 11 July 2003, University of Technology, Sydney, New South Wales.

Colasanti, Ric, Dawson, Rebecca, Malda, Jos, Pettet, Graeme, & Please, Colin (2008) A cellular automata simulation of calcium driven tissue differentiation in human skin equivalent models. In Adamatzky, A, Alonso-Sanz, R, Lawniczak, A, Juarez Martinez, G, Morita, K, & Worsch, T (Eds.) Proceedings of Automata 2008: Theory and applications of cellular automata, 12-14 June 2008, United Kingdom, Bristol.

Fulford, G.R., Lee, X.J., Berman, D., & Hamilton, G.S. (2011) Interaction of myxomatosis and Rabbit Haemorrhagic Disease in wild rabbit. In Chan, F., Marinova, D, & Anderssen, R.S. (Eds.) MODSIM2011, 19th International Congress on Modelling and Simulation., Modelling and Simulation Society of Australia and New Zealand, Perth, WA, pp. 912-918.

Gordon, James J. & Towsey, Michael W. (2005) SVM Based Prediction of Bacterial Transcription Start Sites. In Proceedings 6th International Conference on Intelligent Data Engineering and Automated Learning (IDEAL’05), July 2005, Brisbane, Australia.
Number of full-text downloads 246
Number of citations in Scopus 1
Number of citations in Web of Science® 1

Harley, K., van Heijster, P., & Pettet, G.J. (2013) A geometric construction of travelling wave solutions to the Keller–Segel model. In Proceedings of the 11th Biennial Engineering Mathematics and Applications Conference, EMAC-2013, Brisbane, QLD, C399-C415.
Number of full-text downloads 36

Maetschke, Stefan R., Towsey, Michael W., & Hogan, James M. (2006) Bacterial promoter modelling and prediction for E. coli and B. subtilis with Beagle. In Workshop on Intelligent Systems for Bioinformatics (WISB-2006), 4th December 2006, Hobart, Tasmania.
Number of full-text downloads 553

Mallet, Daniel G., Heymer, Kelly-Jean, & Wilson, David P. (2008) A hybrid CA-PDE Model of chlamydia trachomatis infection in the female genital tract. In 6th International Congress on Industrial and Applied Mathematics, 16-20 July 2007, Zurich. (Unpublished)
Number of full-text downloads 200

Oqielat, Moa'Ath, Belward, John A., Turner, Ian W., & Loch, B. I. (2007) A Hybrid Clough-Tocher Radial Basis Function Method for Modelling Leaf Surfaces. In MODSIM 2007 International Congress on Modelling and Simulation, 10-13 December 2007, Christchurch, New Zealand.
Number of full-text downloads 143
Number of citations in Scopus 2

Sofronov, George, Evans, Gareth E., Keith, Jonathan M., & Kroese, Dirk P. (2007) Identifying Change-points in Biological Sequences via Sequential Importance Sampling. In Oxley, Les & Kulasiri, Don (Eds.) MODSIM 2007 International Congress on Modelling and Simulation, 10-13 December 2007, Christchurch, New Zealand.
Number of full-text downloads 65

Trisilowati,, McCue, Scott, & Mallet, Dann (2012) An improved model of tumour-immune system interactions. In Sri Wahyuni, (Ed.) Proceedings of the 6th Southeast Asian Mathematical Society – Gadjah Mada University International Conference on Mathematics and its Applications 2011, Yogyakarta University, Indonesia, pp. 895-904.
Number of full-text downloads 59

Wilson, Cameron, Pettet, Graeme J., Chen, Gongfa, Mishra, Sanjay K., Steck, Roland, Wullschleger, Martin E., et al. (2006) Is callus formation optimised for fracture stability? A computational study. In Conference of the International Society for Fracture Repair, 10th, 22-24 May 2006, Adelaide, Australia.
Number of full-text downloads 143

Yu, Zuguo, Anh, Vo V., Zhou, Yu, & Zhou, Li-Qian (2007) Numerical Sequence Representation of DNA Sequences and Methods To Distinguish Coding And Non-Coding Sequences in a Complete Genome. In Callaos, N., Lesso, W., Zinn, C., & Zmazek, B. (Eds.) 11th World Multi-Conference on Systemics, Cybernetics and Informatics: WMSCI 2007, 8-11 July 2007, Florida, USA.
Number of full-text downloads 261

Yu, Zuguo, Mao, Z., Zhou, Li-Qian, & Anh, Vo V. (2007) A Mutual Information Based Sequence Distance For Vertebrate Phylogeny Using Complete Mitochondrial Genomes. In Third International Conference on Natural Computation (ICNC 2007), 24-27 August 2007, Haikou, China.
Number of full-text downloads 352
Number of citations in Scopus 8

Yu, Zuguo, Zhou, Li-Qian, Anh, Vo V., Chu, Ka-Hou, Li, C. P., & Chen, Y. J. (2007) Distance-based analysis to reveal vertebrate phylogeny without sequence alignment using complete mitochondrial genomes. In Callaos, N., Lesso, W., Zinn, C., & Zmazek, B. (Eds.) 11th World Multi-Conference on Systemics, Cybernetics and Informatics: WMSCI 2007, 8-11 July 2007, Florida, USA.
Number of full-text downloads 208
Number of citations in Scopus 1

Zhou, Li-Qian, Yu, Zuguo, Nie, P. R., Liao, F. F., Anh, Vo V., & Chen, Y. J. (2007) Log-correlation Distance And Fourier Transform With Kullback-Leibler Divergence Distance For Construction Of Vertebrate Phylogeny Using Complete Mitochondrial Genomes. In Third International Conference on Natural Computation (ICNC 2007), 24-27 August 2007, Haikou, China.
Number of full-text downloads 288
Number of citations in Scopus 4

Zhou, Yu, Zhou, Li-Qian, Yu, Zu-Guo, & Anh, Vo V. (2007) Distinguish Coding And Noncoding Sequences In A Complete Genome Using Fourier Transform. In Third International Conference on Natural Computation (ICNC 2007), 24-27 August 2007, Haikou, China.
Number of full-text downloads 228
Number of citations in Scopus 4
Number of citations in Web of Science® 1

Report

McCue, Scott W., Bartsch, Thomas, Dyson, Rosemary, Beguerisse-Diaz, Mariano, & Jensen, Oliver (2009) Modelling cell separation during plant organ abscission. The Centre for Plant Integrative Biology, University of Nottingham.

This list was generated on Sat Sep 27 09:21:51 2014 EST.