Items where Subject is "Australian and New Zealand Standard Research Classification > BIOLOGICAL SCIENCES (060000) > BIOCHEMISTRY AND CELL BIOLOGY (060100) > Bioinformatics (060102)"

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Number of items at this level: 21.

Journal Article

An, Jiyuan, Lai, John, Lehman, Melanie, & Nelson, Colleen (2012) miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data. Nucleic Acid Research, 41(2), pp. 727-737.
Number of full-text downloads 39
Number of citations in Scopus 21
Number of citations in Web of Science® 19

An, Jiyuan, Lai, John, Sajjanhar, Atul, Batra, Jyotsna, Wang, Chenwei, & Nelson, Colleen C. (2014) J-Circos : an interactive Circos plotter. Bioinformatics. (In Press)

An, Jiyuan, Lai, John, Sajjanhar, Atul, Lehman, Melanie L., & Nelson, Colleen C. (2014) miRPlant : an integrated tool for identification of plant miRNA from RNA sequencing data. BMC Bioinformatics, 15(275).
Number of full-text downloads 16

An, Jiyuan, Liew, Alan Wee-Chung, & Nelson, Colleen (2012) Seed-based biclustering of gene expression data. PLoS ONE, 7(8).
Number of full-text downloads 31
Number of citations in Scopus 1

Anh, Vo, Yang, Jian-Yi, Yu, Zu-Guo, Zhou, Li-Qian, & Zhou, Yu (2008) Human Pol ll promoter recognition based on primary sequences and free energy of dinucleotides. BMC Informatics, 9(113), pp. 1-13.
Number of full-text downloads 44
Number of citations in Scopus 15
Number of citations in Web of Science® 7

Broadbent, J. A., Sampson, D. L., Broszczak, D. A., Upton, Z., & Huygens, F. (2015) Choose wisely: Network, ontology and annotation resources for the analysis of Staphylococcus aureus omics data. International Journal of Medical Microbiology. (In Press)

Fang, Xiaodong, Seim, Inge, Huang, Zhiyong, Gerashchenko, Maxim V., Xiong, Zhiqiang, Turanov, Anton A., et al. (2014) Adaptations to a subterranean environment and longevity revealed by the analysis of mole rat genomes. Cell Reports, 8(5), pp. 1354-1364.
Number of citations in Scopus 1
Number of citations in Web of Science® 2

Haass-Koffler, Carolina L., Naeemuddin, Mohammad, & Bartlett, Selena E. (2012) An analytical tool that quantifies cellular morphology changes from three-dimensional fluorescence images. Journal of Visualized Experiments, pp. 4233-4237.

Han, Guo-Sheng, Yu, Zu-Guo, Anh, Vo, Krishnajith, Anaththa P.D., & Tian, Yu-Chu (2013) An ensemble method for predicting subnuclear localizations from primary protein structures. PLOS ONE, 8(2), e57225:1-e57225:14.
Number of full-text downloads 119
Number of citations in Scopus 5
Number of citations in Web of Science® 6

Seim, Inge, Carter, Shea L., Herington, Adrian C., & Chopin, Lisa K. (2009) The proximal first exon architecture of the murine ghrelin gene is highly similar to its human orthologue. BMC Research Notes, 2(85).
Number of full-text downloads 86
Number of citations in Scopus 3

Towsey, Michael W., Timms, Peter, Hogan, James M., & Mathews, Sarah A. (2008) The cross-species prediction of bacterial promoters using a support vector machine. Computational Biology and Chemistry, 32(5), pp. 359-366.
Number of citations in Scopus 7
Number of citations in Web of Science® 3

Wang, Chenwei, Taciroglu, Alperen, Maetschke, Stefan R, Nelson, Colleen C., Ragan, Mark A, & Davis, Melissa J (2012) mCOPA: analysis of heterogeneous features in cancer expression data. Journal of Clinical Bioinformatics, 2(1), p. 22.
Number of full-text downloads 59
Number of citations in Scopus 7

Wiliem, Arnold, Sanderson, Conrad, Wong, Yongkang, Hobson, Peter, Minchin, Rodney F., & Lovell, Brian C. (2014) Automatic classification of human epithelial type 2 cell indirect immunofluorescence images using cell pyramid matching. Pattern Recognition, 47(7), pp. 2315-2324.
Number of citations in Scopus 4

Yu, Zu-Guo, Chu, Ka-Hou, Li, Chi Pang, Anh, Vo, Zhou, Li-Qian, & Wang, Roger (2010) Whole-proteome phylogeny of large dsDNA viruses and parvoviruses through a composition vector method related to dynamical language model. BMC Evolutionary Biology, 10(192), pp. 1-11.
Number of citations in Scopus 14
Number of citations in Web of Science® 11

Conference Paper

Anh, Vo, Chu, K, Li, C, Yu, Zu-Guo, & Zhou, Li-Qian (2008) Phylogenetic analysis of polyomaviruses based on their complete genomes. In Kellenberger, P (Ed.) Natural Computation, 2008. ICNC '08. Fourth International Conference on, IEE Computer Society, China, Shandong, Jinan, pp. 80-84.
Number of citations in Scopus 1
Number of citations in Web of Science® 1

Anh, Vo, Yang, Jian-Yi, & Yu, Zu-Guo (2008) Protein structure classification based on chaos game representation. In Kellenberger, P (Ed.) The Proceedings of the Fourth International Conference on Natural Computation (ICNC 2008), 18 - 20 October 2008, China, Shandong, Jinan.
Number of citations in Scopus 1
Number of citations in Web of Science® 1

Anh, Vo, Yu, Zu-Guo, & Zhou, Yu (2008) Protein structure classification using local holder exponents estimated by wavelet transfom. In Kellenberger, P (Ed.) The Proceedings of the Fourth International Conference on Natural Computation (ICNC 2008), 18 - 20 October 2008, China, Shandong, Jinan.

Other

Bowles, Christopher J. & Hogan, James M. (2014) Supplementary information : weighted tree kernels for sequence analysis. Proceedings of ESANN 2014. (In Press)
Number of full-text downloads 31

Hogan, James M. & Peut, Timothy (2014) Supplementary material : large scale read classification for next generation sequencing. International Conference on Computational Science. (In Press)
Number of full-text downloads 23

This list was generated on Sat May 23 13:22:59 2015 AEST.