Items where Subject is "Australian and New Zealand Standard Research Classification > BIOLOGICAL SCIENCES (060000) > BIOCHEMISTRY AND CELL BIOLOGY (060100) > Bioinformatics (060102)"
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- Australian and New Zealand Standard Research Classification (44152)
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Number of items at this level: 22.
An, Jiyuan, Lai, John, Lehman, Melanie, & Nelson, Colleen (2012) miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data. Nucleic Acid Research, 41(2), pp. 727-737.
An, Jiyuan, Lai, John, Sajjanhar, Atul, Batra, Jyotsna, Wang, Chenwei, & Nelson, Colleen C. (2015) J-Circos : an interactive Circos plotter. Bioinformatics, 31(9), pp. 1463-1465.
An, Jiyuan, Lai, John, Sajjanhar, Atul, Lehman, Melanie L., & Nelson, Colleen C. (2014) miRPlant : an integrated tool for identification of plant miRNA from RNA sequencing data. BMC Bioinformatics, 15(1), p. 275.
An, Jiyuan, Lai, John, Wood, David L A, Sajjanhar, Atul, Wang, Chenwei, Tevz, Gregor, et al. (2015) RNASeqBrowser: A genome browser for simultaneous visualization of raw strand specific RNAseq reads and UCSC genome browser custom tracks. BMC Genomics, 16, p. 145.
An, Jiyuan, Liew, Alan Wee-Chung, & Nelson, Colleen (2012) Seed-based biclustering of gene expression data. PLoS ONE, 7(8).
Anh, Vo, Yang, Jian-Yi, Yu, Zu-Guo, Zhou, Li-Qian, & Zhou, Yu (2008) Human Pol ll promoter recognition based on primary sequences and free energy of dinucleotides. BMC Informatics, 9(113), pp. 1-13.
Broadbent, J.A., Sampson, D.L., Broszczak, D.A., Upton, Z., & Huygens, F. (2015) Choose wisely: Network, ontology and annotation resources for the analysis of Staphylococcus aureus omics data. International Journal of Medical Microbiology, 305(3), pp. 339-347.
Fang, Xiaodong, Seim, Inge, Huang, Zhiyong, Gerashchenko, Maxim V., Xiong, Zhiqiang, Turanov, Anton A., et al. (2014) Adaptations to a subterranean environment and longevity revealed by the analysis of mole rat genomes. Cell Reports, 8(5), pp. 1354-1364.
Grech, Brian J., Mathews, Sarah A., & Timms, Peter (2008) Phylogenetic comparison of the known Chlamydia trachomatis σ66 promoters across to Chlamydia pneumoniae and Chlamydia caviae identifies seven poorly conserved promoters. Research in Microbiology, 159(7-8), pp. 550-556.
Haass-Koffler, Carolina L., Naeemuddin, Mohammad, & Bartlett, Selena E. (2012) An analytical tool that quantifies cellular morphology changes from three-dimensional fluorescence images. Journal of Visualized Experiments, pp. 4233-4237.
Han, Guo-Sheng, Yu, Zu-Guo, Anh, Vo, Krishnajith, Anaththa P.D., & Tian, Yu-Chu (2013) An ensemble method for predicting subnuclear localizations from primary protein structures. PLOS ONE, 8(2), e57225:1-e57225:14.
Seim, Inge, Carter, Shea L., Herington, Adrian C., & Chopin, Lisa K. (2009) The proximal first exon architecture of the murine ghrelin gene is highly similar to its human orthologue. BMC Research Notes, 2(85).
Towsey, Michael W., Timms, Peter, Hogan, James M., & Mathews, Sarah A. (2008) The cross-species prediction of bacterial promoters using a support vector machine. Computational Biology and Chemistry, 32(5), pp. 359-366.
Wang, Chenwei, Taciroglu, Alperen, Maetschke, Stefan R, Nelson, Colleen C., Ragan, Mark A, & Davis, Melissa J (2012) mCOPA: analysis of heterogeneous features in cancer expression data. Journal of Clinical Bioinformatics, 2(1), p. 22.
Wiliem, Arnold, Sanderson, Conrad, Wong, Yongkang, Hobson, Peter, Minchin, Rodney F., & Lovell, Brian C. (2014) Automatic classification of human epithelial type 2 cell indirect immunofluorescence images using cell pyramid matching. Pattern Recognition, 47(7), pp. 2315-2324.
Yu, Zu-Guo, Chu, Ka-Hou, Li, Chi Pang, Anh, Vo, Zhou, Li-Qian, & Wang, Roger (2010) Whole-proteome phylogeny of large dsDNA viruses and parvoviruses through a composition vector method related to dynamical language model. BMC Evolutionary Biology, 10(192), pp. 1-11.
Anh, Vo, Chu, K, Li, C, Yu, Zu-Guo, & Zhou, Li-Qian (2008) Phylogenetic analysis of polyomaviruses based on their complete genomes. In Kellenberger, P (Ed.) Natural Computation, 2008. ICNC '08. Fourth International Conference on, IEE Computer Society, China, Shandong, Jinan, pp. 80-84.
Anh, Vo, Yang, Jian-Yi, & Yu, Zu-Guo (2008) Protein structure classification based on chaos game representation. In Kellenberger, P (Ed.) The Proceedings of the Fourth International Conference on Natural Computation (ICNC 2008), 18 - 20 October 2008, China, Shandong, Jinan.
Anh, Vo, Yu, Zu-Guo, & Zhou, Yu (2008) Protein structure classification using local holder exponents estimated by wavelet transfom. In Kellenberger, P (Ed.) The Proceedings of the Fourth International Conference on Natural Computation (ICNC 2008), 18 - 20 October 2008, China, Shandong, Jinan.
Bowles, Christopher J. & Hogan, James M. (2014) Supplementary information : weighted tree kernels for sequence analysis. Proceedings of ESANN 2014. (In Press)
Hogan, James M. Supplementary Information : Hogan, Holland, Holloway, Petit and Read : Read Classification for Next Generation Sequencing, ESANN 2013, April 2013. (Unpublished)
Hogan, James M. & Peut, Timothy (2014) Supplementary material : large scale read classification for next generation sequencing. International Conference on Computational Science. (In Press)