Browse By Person: Li, Zhixiu

Li, Zhixiu, McRae, Allan F., Wang, Geng, Ellis, Jonathan J., Whyte, Jessica, Kenna, Tony J., Brown, Matthew A., & Evans, David M. (2023) Genotype by sex interactions in ankylosing spondylitis. Nature Genetics, 55(1), pp. 14-16.

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Li, Zhixiu, Khan, Mohammad K., Villiger, Peter M., van der Linden, Sjef, Brown, Matthew A., & Khan, Muhammad A. (2022) Mortality in ankylosing spondylitis according to treatment: comment on the article by Ben Shabat et al. Arthritis Care and Research, 74(12), pp. 2120-2121.

Van Der Linden, Sjef M., Khan, Muhammad Asim, Li, Zhixiu, Baumberger, Heinz, Zandwijk, Hermine Van, Khan, Mohammad Kazim, Villiger, Peter M., & Brown, Matthew A. (2022) Recurrence of axial spondyloarthritis among first-degree relatives in a prospective 35-year-follow-up family study. RMD Open, 8(2), Article number: e002208.

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Van Der Linden, Sjef M., Khan, Muhammad Asim, Li, Zhixiu, Baumberger, Heinz, Van Zandwijk, Hermine, Khan, Kazim, Villiger, Peter M., & Brown, Matthew A. (2022) Factors predicting axial spondyloarthritis among first-degree relatives of probands with ankylosing spondylitis: A family study spanning 35 years. Annals of the Rheumatic Diseases, 81(6), pp. 831-837.

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Wang, Li, Jiang, Lei, Pan, Dongyan, Wang, Qinghua, Yin, Zeyu, Kang, Zijian, Tian, Haoran, Geng, Xuqiang, Shao, Jinsong, Pan, Wenjie, Yin, Jian, Fang, Li, Wang, Yue, Zhang, Weide, Li, Zhixiu, Zheng, Jun, Hu, Wenxin, Pan, Yunbao, Yu, Dong, Guo, Shicheng, Lu, Wei, Li, Qiang, Zhou, Yunyun, & Xu, Huji (2022) Novel approach by natural language processing for COVID-19 knowledge discovery. Biomedical Journal, 45(3), pp. 472-481.

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Stoll, Matthew L., Dequattro, Kimberly, Li, Zhixiu, Sawhney, Henna, Weiss, Pamela F., Nigrovic, Peter A., Wright, Tracey B., Schikler, Kenneth, Edelheit, Barbara, Morrow, Casey D., Reveille, John D., Brown, Matthew A., & Gensler, Lianne S. (2022) Impact of HLA-B27 and Disease Status on the Gut Microbiome of the Offspring of Ankylosing Spondylitis Patients. Children, 9(4), Article number: 569.

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Williams, Camilla J., Torquati, Luciana, Li, Zhixiu, Lea, Rodney A., Croci, Ilaria, Keating, Eliza, Little, Jonathan P., Eynon, Nir, & Coombes, Jeff S. (2022) Oligofructose-Enriched Inulin Intake, Gut Microbiome Characteristics, and the V.O2 Peak Response to High-Intensity Interval Training in Healthy Inactive Adults. Journal of Nutrition, 152(3), pp. 680-689.

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Liang, Shide, Li, Zhixiu, Zhan, Jian, & Zhou, Yaoqi (2022) De novo protein design by an energy function based on series expansion in distance and orientation dependence. Bioinformatics, 38(1), pp. 86-93.

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Li, Zhixiu, Van Der Linden, Sjef M., Khan, Muhammad Asim, Baumberger, Heinz, Zandwijk, Hermine Van, Khan, Mohammad Kazim, Villiger, Peter M., & Brown, Matthew A. (2022) Heterogeneity of axial spondyloarthritis: genetics, sex and structural damage matter. RMD Open, 8(1), Article number: e002302.

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Williams, Camilla J., Li, Zhixiu, Harvey, Nicholas, Lea, Rodney A., Gurd, Brendon J., Bonafiglia, Jacob T., Papadimitriou, Ioannis, Jacques, Macsue, Croci, Ilaria, Stensvold, Dorthe, Wisloff, Ulrik, Taylor, Jenna L., Gajanand, Trishan, Cox, Emily R., Ramos, Joyce S., Fassett, Robert G., Little, Jonathan P., Francois, Monique E., Hearon, Christopher M., Sarma, Satyam, Janssen, Sylvan L.J.E., Van Craenenbroeck, Emeline M., Beckers, Paul, Cornelissen, Véronique A., Howden, Erin J., Keating, Shelley E., Yan, Xu, Bishop, David J., Bye, Anja, Haupt, Larisa M., Griffiths, Lyn R., Ashton, Kevin J., Brown, Matthew A., Torquati, Luciana, Eynon, Nir, & Coombes, Jeff S. (2021) Genome wide association study of response to interval and continuous exercise training: the Predict-HIIT study. Journal of Biomedical Science, 28, Article number: 37.

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Brown, Matthew A. & Li, Zhixiu (2021) Polygenic risk scores and rheumatic diseases. Chinese Medical Journal, 134(21), pp. 2521-2524.

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Li, Zhixiu, Wu, Xin, Leo, Paul J., De Guzman, Erika, Akkoc, Nurullah, Breban, Maxime, MacFarlane, Gary J., Mahmoudi, Mahdi, Marzo-Ortega, Helena, Anderson, Lisa K., Wheeler, Lawrie, Chou, Chung Tei, Harrison, Andrew A., Stebbings, Simon, Jones, Gareth T., Bang, So Young, Wang, Geng, Jamshidi, Ahmadreza, Farhadi, Elham, Song, Jing, Lin, Li, Li, Mengmeng, Wei, James Cheng Chung, Martin, Nicholas G., Wright, Margaret J., Lee, Min Jae, Wang, Yuqin, Zhan, Jian, Zhang, Jin San, Wang, Xiaobing, Jin, Zi Bing, Weisman, Michael H., Gensler, Lianne S., Ward, Michael M., Rahbar, Mohammad Hossein, Diekman, Laura, Kim, Tae Hwan, Reveille, John D., Wordsworth, Bryan Paul, Xu, Huji, & Brown, Matthew A. (2021) Polygenic Risk Scores have high diagnostic capacity in ankylosing spondylitis. Annals of the Rheumatic Diseases, 80(9), pp. 1168-1174.

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Shanavas, Mohamed, Law, Soi Cheng, Hertzberg, Mark, Hicks, Rodney J., Seymour, John F., Li, Zhixiu, Merida de Long, Lilia, Nath, Karthik, Sabdia, Muhammed B., Gunawardana, Jay, Gandhi, Maher K., & Keane, Colm (2021) Intratumoral T-cell receptor repertoire is predictive of interim PET scan results in patients with diffuse large B-cell lymphoma treated with rituximab/cyclophosphamide/doxorubicin/prednisolone/vincristine (R-CHOP) chemoimmunotherapy. Clinical and Translational Immunology, 10(11), Article number: e1351.

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Hildebrand, Joanne M., Kauppi, Maria, Majewski, Ian J., Liu, Zikou, Cox, Allison J., Miyake, Sanae, Petrie, Emma J., Silk, Michael A., Li, Zhixiu, Tanzer, Maria C., Brumatti, Gabriela, Young, Samuel N., Hall, Cathrine, Garnish, Sarah E., Corbin, Jason, Stutz, Michael D., Di Rago, Ladina, Gangatirkar, Pradnya, Josefsson, Emma C., Rigbye, Kristin, Anderton, Holly, Rickard, James A., Tripaydonis, Anne, Sheridan, Julie, Scerri, Thomas S., Jackson, Victoria E., Czabotar, Peter E., Zhang, Jian Guo, Varghese, Leila, Allison, Cody C., Pellegrini, Marc, Tannahill, Gillian M., Hatchell, Esme C., Willson, Tracy A., Stockwell, Dina, de Graaf, Carolyn A., Collinge, Janelle, Hilton, Adrienne, Silke, Natasha, Spall, Sukhdeep K., Chau, Diep, Athanasopoulos, Vicki, Metcalf, Donald, Laxer, Ronald M., Bassuk, Alexander G., Darbro, Benjamin W., Fiatarone Singh, Maria A., Vlahovich, Nicole, Hughes, David, Kozlovskaia, Maria, Ascher, David B., Warnatz, Klaus, Venhoff, Nils, Thiel, Jens, Biben, Christine, Blum, Stefan, Reveille, John, Hildebrand, Michael S., Vinuesa, Carola G., McCombe, Pamela, Brown, Matthew A., Kile, Benjamin T., McLean, Catriona, Bahlo, Melanie, Masters, Seth L., Nakano, Hiroyasu, Ferguson, Polly J., Murphy, James M., Alexander, Warren S., & Silke, John (2020) A missense mutation in the MLKL brace region promotes lethal neonatal inflammation and hematopoietic dysfunction. Nature Communications, 11(1), Article number: 3150.

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Brown, Matthew A., Xu, Huji, & Li, Zhixiu (2020) Genetics and the axial spondyloarthritis spectrum. Rheumatology (United Kingdom), 59(Supplement 4), IV58-IV66.

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Brown, Matthew A., Li, Zhixiu, & Cao, Kim Anh Lê (2020) Biomarker development for axial spondyloarthritis. Nature Reviews Rheumatology, 16(8), pp. 448-463.

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Shi, Xiu Yu, Wang, Geng, Li, Ting, Li, Zhixiu, Leo, Paul, Liu, Zhisheng, Wu, Gefei, Zhu, Hongmin, Zhang, Yuqin, Li, Dong, Gao, Li, Yang, Liu, Wang, Wei, Liao, Jianxiang, Wang, Jiwen, Zhou, Shuizhen, Wang, Hua, Li, Xiaojing, Gao, Jingyun, Zhang, Li, Shu, Xiaomei, Li, Dan, Li, Yan, Chen, Chunhong, Zhang, Xiuju, Partida, Gabriel Cuellar, Lundberg, Mischa, Reutens, David, Bartlett, Perry, Brown, Matthew A., Zou, Li Ping, & Xu, Huji (2020) Identification of susceptibility variants to benign childhood epilepsy with centro-temporal spikes (BECTS) in Chinese Han population. EBioMedicine, 57, Article number: 102840.

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Zhang, Hao, Kang, Zijian, Gong, Haiyi, Xu, Da, Wang, Jing, Li, Zhixiu, Li, Zifu, Cui, Xinggang, Xiao, Jianru, Zhan, Jian, Meng, Tong, Zhou, Wang, Liu, Jianmin, & Xu, Huji (2020) Digestive system is a potential route of COVID-19: An analysis of single-cell coexpression pattern of key proteins in viral entry process. Gut, 69(6), pp. 1010-1018.

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Huang, Xiu Feng, Li, Zhixiu, de Guzman, Erika, Robinson, Philip, Gensler, Lianne, Ward, Michael M., Rahbar, Mohammad Hossein, Lee, Min Jae, Weisman, Michael H., MacFarlane, Gary J., Jones, Gareth T., Klingberg, Eva, Forsblad-D’Elia, Helena, McCluskey, Peter, Wakefield, Denis, Coombes, Jeff S., Fiatarone Singh, Maria A., Mavros, Yorgi, Vlahovich, Nicole, Hughes, David C., Marzo-Ortega, Helena, van der Horste-Bruinsma, Irene, O’Shea, Finbar, Martin, Tammy M., Rosenbaum, James, Breban, Maxime, Jin, Zi Bing, Leo, Paul, Reveille, John D., Wordsworth, B. Paul, & Brown, Matthew A. (2020) Genomewide association study of acute anterior uveitis identifies new susceptibility loci. Investigative Ophthalmology and Visual Science, 61(6), Article number: 3.

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Wang, Geng, Kim, Tae Hwan, Li, Zhixiu, Cortes, Adrian, Kim, Kwangwoo, Bang, So Young, Leo, Paul, Brown, Matthew A., & Xu, Huji (2020) MHC associations of ankylosing spondylitis in East Asians are complex and involve non-HLA-B27 HLA contributions. Arthritis Research and Therapy, 22(1), Article number: 74.

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Broadhouse, Kathryn M., Singh, Maria Fiatarone, Suo, Chao, Gates, Nicola, Wen, Wei, Brodaty, Henry, Jain, Nidhi, Wilson, Guy C., Meiklejohn, Jacinda, Singh, Nalin, Baune, Bernhard T., Baker, Michael, Foroughi, Nasim, Wang, Yi, Kochan, Nicole, Ashton, Kevin, Brown, Matt, Li, Zhixiu, Mavros, Yorgi, Sachdev, Perminder S., & J.Valenzuela, Michael (2020) Hippocampal plasticity underpins long-term cognitive gains from resistance exercise in MCI. NeuroImage: Clinical, 25, Article number: 102182.

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Li, Zhixiu, Akar, Servet, Yarkan, Handan, Lee, Sau Kuen, Cetin, Pınar, Can, Gercek, Kenar, Gokce, Capa, Fernur, Pamuk, Omer Nuri, Pehlivan, Yavuz, Cremin, Katie, de Guzman, Erika, Harris, Jessica, Wheeler, Lawrie, Jamshidi, Ahmadreza, Vojdanian, Mahdi, Farhadi, Elham, Ahmadzadeh, Nooshin, Yüce, Zeynep, Dalkılıc, Ediz, Solmaz, Dilek, Akın, Berrin, Donmez, Salim, Sarı, İsmail, Leo, Paul J., Kenna, Tony J., Onen, Fatos, Mahmoudi, Mahdi, Brown, Matthew A., & Akkoc, Nurullah (2019) Genome-wide association study in Turkish and Iranian populations identify rare familial Mediterranean fever gene (MEFV) polymorphisms associated with ankylosing spondylitis. PLoS Genetics, 15(4), Article number: e1008038.

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Asquith, Mark, Sternes, Peter, Costello, Mary-Ellen, Karstens, Lisa, Diamond, Sarah, Martin, Tammy, Li, Zhixiu, Clout, Mhairi, Spector, Timothy, Le Cao, Kim-Anh, Rosenbaum, James, & Brown, Matt (2019) HLA alleles associated with risk of ankylosing spondylitis and rheumatoid arthritis influence the gut microbiome. Arthritis and Rheumatology, 71(10), pp. 1642-1650.

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Williams, Camilla J., Gurd, Brendon J., Bonafiglia, Jacob T., Voisin, Sarah, Li, Zhixiu, Harvey, Nicholas, Croci, Ilaria, Taylor, Jenna L., Gajanand, Trishan, Ramos, Joyce S., Fassett, Robert G., Little, Jonathan P., Francois, Monique E., Hearon, Christopher M., Sarma, Satyam, Janssen, Sylvan L.J.E., Van Craenenbroeck, Emeline M., Beckers, Paul, Cornelissen, Véronique A., Pattyn, Nele, Howden, Erin J., Keating, Shelley E., Bye, Anja, Stensvold, Dorthe, Wisloff, Ulrik, Papadimitriou, Ioannis, Yan, Xu, Bishop, David J., Eynon, Nir, & Coombes, Jeff S. (2019) A multi-center comparison of V̇O2peak trainability between interval training and moderate intensity continuous training. Frontiers in Physiology, 10, Article number: 19.

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Blum, Stefan, Ji, Ying, Pennisi, David, Li, Zhixiu, Leo, Paul, McCombe, Pamela, & Brown, Matt (2018) Genome-wide association study in Guillain-Barre syndrome. Journal of Neuroimmunology, 323, pp. 109-114.

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Santos, Margarida, Couto, Ana, Foroni, Iris, Bettencourt, Bruno, Li, Zhixiu, Meneses, Raquel, Wheeler, Lawrie, Pereira, Joaquim, Pimentel-Santos, Fernando Manuel, Fonseca, Joao Eurico, Alves, Helena, Martinho, Antonio, Lima, Manuela, Brown, Matt, & Bruges-Armas, Jacome (2018) Non-classical human leucocyte antigens in ankylosing spondylitis: possible association with HLA-E and HLA-F. RMD Open, 4(1), Article number: e000677 1-9.

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O'Connell, James, Li, Zhixiu, Hanson, Jack, Heffernan, Rhys, Lyons, James, Paliwal, Kuldip, Dehzangi, Abdollah, Yang, Yuedong, & Zhou, Yaoqi (2018) SPIN2: Predicting sequence profiles from protein structures using deep neural networks. Proteins: Structure, Function and Genetics, 86(6), pp. 629-633.

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Li, Zhixiu, Haynes, Katelin, Pennisi, David, Anderson, Lisa, Song, Xiaoxia, Thomas, Gethin, Kenna, Tony, Leo, Paul, & Brown, Matt (2017) Epigenetic and gene expression analysis of ankylosing spondylitis-associated loci implicate immune cells and the gut in the disease pathogenesis. Genes and Immunity, 18(3), pp. 135-143.

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Zhang, Tuo, Faraggi, Eshel, Li, Zhixiu, & Zhou, Yaoqi (2017) Intrinsic disorder and semi-disorder prediction by SPINE-D. Methods in Molecular Biology, 1484, pp. 159-174.

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Li, Zhixiu & Brown, Matthew A. (2017) Progress of genome-wide association studies of ankylosing spondylitis. Clinical and Translational Immunology, 6(12), Article number: e163.

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Wang, Xiaobing, Ellis, Jonathan, Pennisi, David, Song, Sharon, Batra, Jyotsna, Hollis, Kelly, Bradbury, Linda, Li, Zhixiu, Kenna, Tony, & Brown, Matt (2017) Transcriptome analysis of ankylosing spondylitis patients before and after TNF-a inhibitor therapy reveals the pathways affected. Genes and Immunity, 18, pp. 184-190.

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Li, Zhixiu, Haynes, Katelin, Thomas, Gethin, Kenna, Tony, Leo, Paul, & Brown, Matt (2016) Epigenetic and expression analysis of Ankylosing spondylitis association loci point to key cell types driving disease (Conference Abstract). Arthritis and Rheumatology, 68(S10), p. 68.

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Zhang, Guolong, Shao, Minhua, Li, Zhixiu, Gu, Yong, Du, Xufeng, Wang, Xiuli, & Li, Ming (2016) Genetic spectrum of dyschromatosis symmetrica hereditaria in Chinese patients including a novel nonstop mutation in ADAR1 gene. BMC Medical Genetics, 17(14), pp. 1-6.

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Ni, Guoying, Chen, Shu, Yang, Yuedong, Cummins, Scott, Zhan, Jian, Li, Zhixiu, Zhu, Bin, Mounsey, Kate, Walton, Shelley, Wei, Ming, Wang, Yuejian, Zhou, Yaoqi, Wang, Tianfang, & Liu, Xiaosong (2016) Investigation the possibility of using peptides with a helical repeating pattern of hydro-phobic and hydrophilic residues to inhibit IL-10. PLoS One, 11(4), Article number: e0153939 1-19.

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Li, Zhixiu, Akar, Servet, Yarkan, Handan, Cetin, Pinar, Can, Gerçek, Harris, Jessica, Brown, Matt, & other, and (2016) Rare Mediterranean Fever (MEFV) gene polymorphisms are associated with Ankylosing spondylitis in Turkish and Iranian population (Conference Abstract). Arthritis and Rheumatology, 68(S10), p. 3123.

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Folkman, Lukas, Yang, Yuedong, Li, Zhixiu, Stantic, Bela, Sattar, Abdul, Mort, Matthew, Cooper, David, Liu, Yunlong, & Zhou, Yaoqi (2015) DDIG-in: detecting disease-causing genetic variations due to frameshifting indels and nonsense mutations employing sequence and structural properties at nucleotide and protein levels. Bioinformatics, 31(10), pp. 1599-1606.

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Li, Zhixiu, Yang, Yuedong, Faraggi, Eshel, Zhan, Jian, & Zhao, Yaoqi (2014) Direct prediction of profiles of sequences compatible with a protein structure by neural networks with fragment-based local and energy-based nonlocal profiles. Proteins: Structure, Function and Genetics, 82(10), pp. 2565-2573.

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Li, Zhixiu, Yang, Yuedong, Zhan, Jian, Dai, Liang, & Zhao, Yaoqi (2013) Energy functions in de novo protein design: Current challenges and future prospects. Annual Review of Biophysics, 42, pp. 315-335.

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Li, Z., Haynes, K., Thomas, G.P., Kenna, T., Leo, P., & Brown, M.A. (2013) Epigenetic and expression analysis of ankylosing spondylitis association loci point to key cell types driving disease. In 10th International Congress on Spondyloarthritides, 2016-09-15 - 2016-09-17.

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Zhang, Tuo, Faraggi, Eshel, Li, Zhixiu, & Zhou, Yaoqi (2013) Intrinsically semi-disordered state and its role in induced folding and protein aggregation. Cell Biochemistry and Biophysics, 67(3), pp. 1193-1205.

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Wang, Jihua, Yang, Yuedong, Cao, Zanxia, Li, Zhixiu, Zhao, Huiying, & Zhou, Yaoqi (2013) The role of semidisorder in temperature adaptation of bacterial FlgM proteins. Biophysical Journal, 105(11), pp. 2598-2605.

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Cheng, Haoyu, Chan, Wai Soon, Li, Zhixiu, Wang, Dan, Liu, Song, & Zhao, Yaoqi (2011) Small open reading frames: Current prediction techniques and future prospect. Current Protein and Peptide Science, 12(6), pp. 503-507.

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